BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H08SP1|AL427832
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1256 1570 0.0
>3x_Contig1256
Length = 6519
Score = 1570 bits (791), Expect = 0.0
Identities = 809/813 (99%), Gaps = 2/813 (0%)
Strand = Plus / Plus
Query: 3 atacaaaggtatcaggttgaatrgccttattatcaatggggcccttatcgacatcccatc 62
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5707 ataccaaggtatcaggttgaatggccttattatcaatggggcccttatcgacatcccatc 5766
Query: 63 cactgggcacatctacagctacaattggcactttcttctcaaattgtttcaattttgaca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5767 cactgggcacatctacagctacaattggcactttcttctcaaattgtttcaattttgaca 5826
Query: 123 aaatatcatcgaatggggctctcatcggtggat-ggaatgagaatccaaacatggaatca 181
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5827 aaatatcatcgaatggggctctcatcggtggataggaatgagaatccaaacatggaatca 5886
Query: 182 atgacacataaggtattctcatgctctagatactctagccagttgtcctcaccttgaccc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5887 atgacacataaggtattctcatgctctagatactctagccagttgtcctcaccttgaccc 5946
Query: 242 aagacaggcacgtcaaagaactctaattgtttcaccaattgtccgtaaaactcttctctt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5947 aagacaggcacgtcaaagaactctaattgtttcaccaattgtccgtaaaactcttctctt 6006
Query: 302 ccggaccttttagggtaatacactaccggttcatacccgaacaacttcaagtgtctagca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6007 ccggaccttttagggtaatacactaccggttcatacccgaacaacttcaagtgtctagca 6066
Query: 362 cagactaacccgtcaccaccgttgttacctggtcccgagattaccaatacctggctcttg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6067 cagactaacccgtcaccaccgttgttacctggtcccgagattaccaatacctggctcttg 6126
Query: 422 gaagattttaccgggtactgttgtaacactgcttcagctaccgataaccctgcgagctcc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6127 gaagattttaccgggtactgttgtaacactgcttcagctaccgataaccctgcgagctcc 6186
Query: 482 atcaattgctgtaaagtgaacccaacagggcccattaactcttgatcaatggaagcagct 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6187 atcaattgctgtaaagtgaacccaacagggcccattaactcttgatcaatggaagcagct 6246
Query: 542 acttttgaactaacaactttgaatgacatttggaattccgttagagtgtgatagtcgtat 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6247 acttttgaactaacaactttgaatgacatttggaattccgttagagtgtgatagtcgtat 6306
Query: 602 agccccagatccttatg-gaactttctaaagccctctcttcttccatgttttacacaact 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6307 agccccagatccttatgagaactttctaaagccctctcttcttccatgttttacacaact 6366
Query: 661 atttcttacagtgcaaggtttccctttattttaacatttttctgcaatgatgagtatggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6367 atttcttacagtgcaaggtttccctttattttaacatttttctgcaatgatgagtatggt 6426
Query: 721 cataggagcggaagaaacgaaacaattttgtagtcaataagaatatgattgtcggcgttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6427 cataggagcggaagaaacgaaacaattttgtagtcaataagaatatgattgtcggcgttt 6486
Query: 781 tgtttataccattatataatacagtatgtatat 813
|||||||||||||||||||||||||||||||||
Sbjct: 6487 tgtttataccattatataatacagtatgtatat 6519
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6264
Number of Sequences: 1807
Number of extensions: 6264
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)